From Sample to Insight: A Hands-on NGS and RNA-Seq Workshop 2023, Sathyabama Institute of Science and Technology, Chennai, Tamil Nadu, 1st - 3rd November 2023

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Event Type:
Venue/Offline Mode
Start Date :
1st November 2023
End Date :
3rd November 2023
Location :
Chennai, Tamil Nadu
Organizer :
Sathyabama Institute of Science and Technology
Category :
Workshop
From Sample to Insight: A Hands-on NGS and RNA-Seq Workshop 2023

About Event

The purpose of this workshop is to get an understanding of Next-Generation Sequencing (NGS) and gain practical experience in RNA Sequencing data analysis. You will be trained to understand NGS data formats and handle potential problems/errors. The course layout has been adapted to beginners' needs in the NGS data analysis field. It allows anyone with no or little background in computer science to get a first hands-on experience in this new and fast-evolving research topic.

Events

Day 01: Intro-lecture on NGS and Data analysis,
Hands-on command line usage in Linux,
Intro to RNA-seq and Workflow,
FASTA, FASTQ, and GTF - formats,
Tool installation and usage, Data QC,
Data preprocessing.

Day 02: RNA alignment concepts and file formats (SAM, BAM, and BED),
Alignment vs Assembly vs K-mer approaches,
RNA-seq Alignment Visualization with IGV Quantification,
Data Normalization and DEG Analysis.

Day 03: DEG Visualization,
DEG Pathway Analysis.

Event Theme

Transcriptomics- Data Analysis

Departments:

Agricultural BioTechnology BioMedical

Certificates will be provided to Participants

Related Links:

From Sample to Insight: A Hands-on NGS and RNA-Seq Workshop 2023 Sathyabama Institute of Science and Technology Chennai Tamil Nadu November 2023 Workshops Workshops in Chennai 2023 Workshops in Tamil Nadu

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